snarl_seed_clusterer.hpp File Reference

#include "snarls.hpp"
#include "snarl_distance_index.hpp"
#include "zip_code.hpp"
#include "hash_map.hpp"
#include "small_bitset.hpp"
#include <structures/union_find.hpp>

Classes
class	vg::SnarlDistanceIndexClusterer
struct	vg::SnarlDistanceIndexClusterer::Seed
	Seed information used in Giraffe. More...
struct	vg::SnarlDistanceIndexClusterer::SeedCache
	Seed information used for clustering. More...
struct	vg::SnarlDistanceIndexClusterer::Cluster
	Cluster information used in Giraffe. More...
struct	vg::SnarlDistanceIndexClusterer::SnarlTreeNodeProblem
struct	vg::SnarlDistanceIndexClusterer::SnarlTreeNodeProblem::SnarlTreeChild
struct	vg::SnarlDistanceIndexClusterer::ClusterHead
struct	vg::SnarlDistanceIndexClusterer::ClusteringProblem

Namespaces
namespace	vg